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Update the migration guide for the output on terminals and in pipes, markdown and hyperlink preferences, verb aliases and gh short flags, -q and -y, exit codes, the inbox default of notifications, config get, auth status and token, pr checkout branch names, pr review types, comment commands, name addressing, and setup-git replacing old helpers. Fix the merge example, which now needs --yes, and the contributor guide's output and layering notes. Signed-off-by: bircni <bircni@icloud.com>